nimble

Workshop on Bayesian analysis of capture-recapture data with hidden Markov models

Excited to be running a workshop on Bayesian capture-recapture inference w hidden Markov models, #rstats & @R_nimble 🥳 Thanks for the invitation @vibass7 🥰 Website is up and running w slides, code & data https://t.

Integrating distance sampling and spatial capture-recapture to assess density of bottlenose dolphins

Check it out 😉🥳 https://t.co/mqyuMSm8QF — Olivier Gimenez 🖖🦦 (@oaggimenez) September 22, 2022

Workshop at ISEC2022 on capture-recapture HMMs and Nimble

Would you like to get the most out of your capture-recapture data? We run a workshop on multisite/state/event HMMs models in #Rstats Nimble w/ Daniel Turek @R_nimble at #ISEC2022 @ISEC_stats_ecol

Introductory workshop on Nimble

📢🥳 With @MaudQueroue and @ValentinLauret we gave a short introduction to nimble @R_nimble nimble is a #rstats 📦 to fit models in the Bayesian framework w/ MCMC, it's also a programming environment for using/coding fns/distns/samplers

Workshop on Bayesian capture-recapture inference

Everything (including data, slides, codes and video recordings) about the workshop we run on Bayesian capture-recapture inference with hidden Markov models in R and Nimble.

Some random piece of code

Gathered some code on occupancy, capture-recapture & epidemiological models, social networks, spatial stuff, textual analyses, reproducible science, etc…

Fitting ODE-based model to data in Nimble

Crude attempt at fitting dynamic ODE-BASED models to noisy data with Nimble.

Nimble and HMM

Playing around w/ awesome @R_nimble to fit multievent #HMM capture-recapture models to data - Code and data here https://t.co/2oHvsplahv Comments welcome 🤗 pic.twitter.com/tA89r80YYV — Olivier Gimenez 🖖 (@oaggimenez) December 2019

Nimble workshop with Daniel Turek

Awesome Nimble @R_nimble workshop given by Daniel Turek from @WilliamsCollege #Bayes #StatisticalEcology at @CNRS_OccitaniE @INEE_CNRS @umontpellier w/ @oksanagrente @ValentinLauret @MaudQueroue @roques_seb @GSouchay @DavidVallecill_ @LoBacon1 pic.twitter.com/7zjQWKeF9P — Olivier Gimenez 🖖 (@oaggimenez) October 23, 2019

Daniel Turek is with us for 6 months!

🥳 It is a pleasure to welcome Daniel Turek @WilliamsCollege for a 6-month sabbatical here in @montpellier_ Stay tuned for more about #Bayes #StatisticalEcology w/ @R_nimble 🤩 Check out Daniel's website ▶️ https://t.