Inferring wildlife poaching in Southeast Asia with multispecies dynamic occupancy models

Check out our new @biorxivpreprint #preprint "Inferring #wildlife #poaching in Southeast Asia with multispecies dynamic #occupancy models" led by @LMarescot ๐Ÿฏ https://t.co/g4NAQnUODw #HMMs @ArnaudLyet @rhohits #NeilCarter @SMARTCnsvTools @AgenceRecherche pic.twitter.com/5EttLyY1S9 — Olivier Gimenez ๐Ÿ–– (@oaggimenez) 15 janvier 2019

Identifying conservation priorities for the critically endangered Balkan lynx

"Identifying conservation priorities for the critically endangered Balkanlynx" https://t.co/EDx0hUUT7v a nice article by #DimeMelovski on our recent @OryxTheJournal paper https://t.co/sVeTwbDlOc (15 days free access) w/ #rstat #OccupancyModels #GIS #maps https://t.co/Uv9uhsAPuY pic.

Calculate the standard error of any function using the delta method

In statistical ecology, we often need to calculate the sampling variance of a function of an estimate of which we do know the sampling variance. I keep forgetting how to implement the so-called delta method in R that allows to get an approximation of this quantity. So in this post I go through two examples in population ecology that should help me remembering. I use the deltamethod function from the msm package.

Scientific research is all about networking

I read this awesome post (in French) by Baptiste Coulmont, professor in sociology, who explored the French academic network in sociology. Coulmont used the composition of PhD commitees to determine academic links between colleagues. The approach very appealing because it uses public data available from the website these.fr. Here, I used Coulmont’s R code to produce the French academic network in ecology. This was a nice opportunity to illustrate how to work in the tidyverse and to do some web scraping using the rvest package.

Looking back at 2018

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New paper on the Balkan lynx

Pretty proud of my modest contribution: data and #rstats code https://t.co/EUG4IgPdKR ๐Ÿค“ — Olivier Gimenez ๐Ÿ’ค (@oaggimenez) 3 dรฉcembre 2018 Out now: The Balkan #lynx is one of the rarest, most threatened & least-studied large carnivores.

New paper!

Check out our @CommsBio paper w/ @IZWberlin "Slow recovery from a disease #epidemic in the #spotted #hyena, a keystone social #carnivore" led by #SarahBenhaiem & @LMarescot @CNRS_OccitaniE @INEE_CNRS @IsiteMUSE @umontpellier #matrixmodel #capturerecapture pic.

Ugo Arbieu's visit

Thanks for your visit @u_arbieu, the great talk and the stimulating discussions! Awesome collaborations to come ๐Ÿค๐Ÿป ๐Ÿ‡ฉ๐Ÿ‡ช๐Ÿ‡ซ๐Ÿ‡ท๐Ÿ‡ฎ๐Ÿ‡น๐Ÿบ https://t.co/04goJ5iMAI @NSantostasi @LouvrierJulie @roques_seb @oksanagrente @MaudQueroue https://t.co/exZsi2qxOA — Olivier Gimenez ๐Ÿ’ค (@oaggimenez) 16ovembre 2018

New paper!

๐Ÿฌ๐Ÿ‡ฌ๐Ÿ‡ท๐Ÿ‡ฎ๐Ÿ‡น๐Ÿ‡ซ๐Ÿ‡ท New paper by @NSantostasi @INEE_CNRS @CNRS_OccitaniE @IsiteMUSE @umontpellier ๐Ÿคฉ๐Ÿ‘ https://t.co/6vQ6d9HevV — Olivier Gimenez ๐Ÿ’ค (@oaggimenez) 9 novembre 2018

Workshop on spatio-temporal models with INLA

#INLA workshop on spatio-temporal models in the beautiful city of #Avignon ๐Ÿคฉ #RESSTE #GdREcoStat @oksanagrente @CREEM_cake pic.twitter.com/nuLhIkMiwO — Olivier Gimenez ๐Ÿ’ค (@oaggimenez) 718